Curriculum Vitae
General Information
| Full Name | Lingbin Ni |
| Contact | lbni@genetics.ac.cn |
| Employer | Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China |
Research Interests
- My research focuses on analysing large-scale high-throughput sequencing data, including epigenomic, transcriptomic, and genomic data; particularly, I mainly focused on 3D genomics, cis-regulatory elements, and gene regulation.
- I am also interested in developing and applying new technologies for genetics, genomics, and molecular biology; therefore, I have worked on developing MNase-seq technology in diverse tissues of plants, and applying Golden Gate assembly of multiple CRISPR gRNAs for functional studies.
- I have further worked on developing computational methods and tools for functional genomics analysis, with the goal of accelerating plant breeding.
Education Experience
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2016 - 2023
Institute of Genetics and Developmental Biology, Chinese Academy of Sciences – Ph.D. in Bioinformatics
- Research: 3D Genomics, Cis-Regulatory Elements, Gene Regulation
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2016 - 2017
University of Chinese Academy of Sciences – Minor in Computer Science and Technology
- Lessons: Advanced Software Engineering, Pattern Recognition and Machine Learning, Data Mining, The Design and Analysis of Computer Algorithms, Database New Technology, Java Programming
Computational Skills
- ○ Programming languages: R, Perl, Python, Java, Ruby, Shell.
- ○ Frameworks: Ruby on Rails, Snakemake.
- ○ Database Systems: MySQL, MonetDB.
- ○ Statistics and Mathematics: Mathematical Statistics, Biostatistics, Machine Learning, Data Mining.
Experimental Skills
- ○ Library Preparation: Developing MNase-seq technology in diverse tissues.
- ○ Vector Construction: Applying Golden Gate assembly of multiple CRISPR gRNAs.